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Regex code for greping

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female_and_baby_regex = r'\b(?:fo*et[ua]|previa|perinatal|natal|neonat|embryo|baby|infant|stillb|born(?!e)|unborn|birth|abortion|gestat|trimester|exposure during pregnancy|[a-z]*menstr|[a-z]*menop|[a-z]*menorr|[a-z]*metrorr|miscarr|vagin|uvul|vulv|[a-z]*ovar[iy]|[a-z]*salpin|oophor|uter[aiu]|cervix|cervicit|endomet|parametritis|clitor|ca*esare|fallop|intermenstr|premenstr|menses|irregular period|matern|breast|mammar|mastit|lactat|low birth weight|pregnan|preeclampsia|premature (?:rupture|labo|baby|deliv)|nipple (?:pain|swell)|donor sperm|adenomyo|fibro[ac]|adrenogenital|anovula|bartholin|cloacal|cystocele|dyspareunia|endomet|galacto|hot fl[au]sh|hydatid|hydrometra|intraductal|labia|leiomyoma|mammary|mastitis|mastopt|menarche|o*estr[ao]|oophoritis|ovulat|papilloma|polycystic|puerper|follicle|_\|_.*?female.*?_\|_|placenta|mue*llerian)'

fetus_regex = r'\b(?:fetus|fetal|foetus|foetal|perinatal|embryo|unborn|stillb|abortion|gestat|trimester|miscarr|ca*esare|premature (?:rupture|labo|baby|deliv)|abortion spontan|abortion threat|foetal |exposure during preg|hydrops foetal)'
infant_regex = r'\b(?:infant\W*patient|natal|neonat|baby|infant|born(?!e)|birth|lactat(?:ion|ing)|low birth weight|nipple\s*(?:pain|swell))'

infant_regex_sym_files = r'(?:(?:lactation|galactostasis|breast (?:feeding|milk)) _\|_|_\|_ (?:lactation|galactostasis|poor milk|infant|low birth weight|during breast feeding|breast (?:feeding|milk)))'

male_regex = r'\b(?:penile|prostat|scrot|testi[cs]|testes|spermat|\w*ospermia|\w*aspermia|sertoli|sperm count|ejaculat|(?:sperm|semen) analysis|sperm concentration|erecti(?:on|le)|motile sperm|blood.{1,10}semen)'  # \btestis in 127 reports 7/2023

female_all_regex = r'\b(?:fo*et[ua]|perinatal|natal|neonat|embryo|baby|infant|stillb|born(?!e)|unborn|birth|abortion|gestat|trimester|metrorrhagia|menorrhagia|miscarr|vagin|ovar|uter[aiu]|cervix|ca*esare|fallop|intermenstr|premenstr|menstr|menses|irregular period|matern|contracept|breast|mastit|lactat|low birth weight|pregnan|postmenopaus|preeclampsia|premature (?:rupture|labo|baby|deliv)|nipple (?:pain|swell)|donor sperm)'

male_pronoun_regex = r'\b(?:male|he|hi[sm](?:self)*)\b'

female_pronoun_regex = r'\b(?:female|she|her(?:self)*)\b'

heart_vascular_regex = r'\b(?:auricul|amyloidosis|aneurysm|angina|angio|aort|aorto|apople|arrhythm|artery|atrial|atrio|asystole|beriberi|bundle branch|cardia|cardio|cardiopulmonary|cardiu|chagas|chest pain|chordae tendinae|congestive|cor pulmon|coronar|coxsackie|cytomegalovirus|defib|dressler|dyssynchrony|ecg|ekg|embol|enterovirus|eosinophilic|fibril|fistula|globinaemia|globinuria|glycogen storage|haemorrhage|heart attack|heart failure|histoplasma|holt\-oram|infarct|iron overload|ischa*emic|kearns\-sayre|lipoma|neoplasm|oesophageal|orthostatic|papillary|pectoris|perfusion|peripartum|pleuroperi|pulmonale|pulseless electrical|purpur|rhabdomyoma|rupture|sarcoidosis|septal|septum|shoshin|shunt|sigmoid|steatosis|syphilitic|tamponade|thromb|transesoph|transtele|tricuspid|triglyc|uraemic|valve disorder|valvul|vasodil|vein|ventric|wolff parkins)' # effusion was on the list but I only see pleural effusion (lungs)